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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatgaaggtcccatttgctggtgccaatgtcgtcttctactctttttaatttcttttctcgaacgcagGTCCTGGACTTGTCTTACAATAGCTTCGAAGGTCCTATTCCTTCCAACTTCGGAGAGTGTCAGGAATTATCGCTCATCAACTTATCACACAACAGGTTTT

Basic information

species Selaginella moellendorffii
transcript EFJ07700
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgctggtgccaatgtcgtcttctactctttttaatttcttttctcgaacgcagGTCCTGGACTTGTCTTACAATAGCTTCGAAGGTCCTATTCCTTCCAACTTCGGAGAGTGTCAGGAATTATCGCTCATCAACTTATCACACAACAGGTTTT
                              ttttaat  putative branch site (score: 3)
                tcgtcttctactcttt  CT-rich tract
                           tctttttaatttcttt  TA-rich tract