1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGTCCCTCCAACAAGAGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAGgtaacatagagcactctatatgttttcactttagtttgaccgtggcaaaaacacgtcacag
species | Selaginella moellendorffii |
transcript | EFJ07503 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAG GTGTCGACTGGGCACCTCGACAACGAGAAGTCCACCCAGAGGAGGCGTATGEST: gi|169041973|gb|FE448478.1|FE448478
genomic: AGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAGgtaacataga ... cacgtcacagGTGTCGACTGGGCACCTCGACAACGAGAAGTCCACCCAGAGGAGGCGTATG
EST: AGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAG GTGTCGACTGGGCACCTCGACAACGAGAAGTCCACCCAGAGGAGGCGTATG
genomic: AGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAGgtaacataga ... cacgtcacagGTGTCGACTGGGCACCTCGACAACGAGAAGTCCACCCAGAGGAGGCGTATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTCCCTCCAACAAGAGTTCCAAGACCTCCAGCAGCTACTGGCCAAGGAAATGGAAGCAAGCCAGgtaacatagagcactctatatgttttcactttagtttgaccgtggcaaaaacacgtcacag
- - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG