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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtgttgttttctcgttcttgctttgccttagtgttcttcttgctttgccttagtgttctaagcacgaacattttctttcagctggttctcgaggatagcatgccatacacctttgatcgtacaacatggatacaggattgtgagtatatcaatttcaacttagacgcttcttgtaatgtgatttttgatttgcagGCAAAGGATTACTTATCGATCCCGTTATAA

Basic information

species Selaginella moellendorffii
transcript EFJ06940
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgagtatatcaatttcaacttagacgcttcttgtaatgtgatttttgatttgcagGCAAAGGATTACTTATCGATCCCGTTATAA
                                          ttttgat  putative branch site (score: 4)
                                         ttttt  CT-rich tract
                                        atttttgattt  TA-rich tract