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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagagataacagatgagaaactgaaatgcagtttttgtttttggattcacagGTACACATCCTCGGCTGTGTATGCAGCTGCATTGGAGGATTTGGTTGGGTCGCTGACGCCAGGAAAGTTTGCTGACTTTGTGGTGTTGTCCGAGTCTCCT

Basic information

species Selaginella moellendorffii
transcript EFJ04969
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaagagataacagatgagaaactgaaatgcagtttttgtttttggattcacagGTACACATCCTCGGCTGTGTATGCAGCTGCATTGGAGGATTTGGTTGGGTCGCTGACGCCAGGAAAGTTTGCTGACTTTGTGGTGTTGTCCGAGTCTCCT
      agataac  putative branch site (score: 3)
                                   tttttgttttt  TA-rich tract