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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatctatctgtgaagctggaaaggaaagaaggcgatctcacaaactttcctgtttgccatacagGGTTTGCTGTTCATCCTCTGTGCTCTGTGCCTGGAAGATGTTTCCAAAGTCAGGGTTGGTAAGCTCTCTTCTTACAGTATCAAGACGCTGCAACACATCA

Basic information

species Selaginella moellendorffii
transcript EFJ04737
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtgaagctggaaaggaaagaaggcgatctcacaaactttcctgtttgccatacagGGTTTGCTGTTCATCCTCTGTGCTCTGTGCCTGGAAGATGTTTCCAAAGTCAGGGTTGGTAAGCTCTCTTCTTACAGTATCAAGACGCTGCAACACATCA
                         atctcac  putative branch site (score: 3)
                                   ctttcctgtttgcc  putative PPT
                                aaacttt  TA-rich tract