1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgatttttggccttgatgtctgatccttttcttgaaatggtgagcctttcagctcatcacaagcgaaataccatcttagacgttgaaataattttatattcatccacaatctagtttcattctcgtcagctgacttcttcacttaagttgcagttttgtttagaagcgcagctgaagcttaactgaacagGTATTGAAGCATCCCGCGGAGGTCTAGTTCTCTGGCCGATTTTGAAGGAGCGGTCTTGAAATTCCTTTAGAATGTTTCGAAAGACTTGTAGAAAACCGAA
species | Physcomitrella patens |
transcript | PP1S9_63V6.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: AGTCTGCCTGCAGCGTACATATCGGAACTTTTTTCGGCAGCTATCTGAAG GTATTGAAGCATCCCGCGGAGGTCTAGTTCTCTGGCCGATTTTGAAGGAGC
genomic: AGTCTGCCTGCAGCGTACATATCGGAACTTTTTTCGGCAGCTATCTGAAGgtgatttttg ... aactgaacagGTATTGAAGCATCCCGCGGAGGTCTAGTTCTCTGGCCGATTTTGAAGGAGC
tcttcacttaagttgcagttttgtttagaagcgcagctgaagcttaactgaacagGTATTGAAGCATCCCGCGGAGGTCTAGTTCTCTGGCCGATTTTGAAGGAGCGGTCTTGAAATTCCTTTAGAATGTTTCGAAAGACTTGTAGAAAACCGAA
gcttaac putative branch site (score: 3)
ttttgttta TA-rich tract