1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...taaaaaaactgcgtttttttttttttttttttttttttttcaaattccatttggaggaatcctagcaccgtctaaccattatctttcattcgttgtgcagAGGACGGAATATACATATCTTTCGCTGATTTGCGCCCATACACTAGTCAAGACCAAGCATGTACTAAAGTTCTTAGCGAGTGGTTCTCCAAACAATTTGA
species | Physcomitrella patens |
transcript | PP1S9_108V6.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GAAGCTGTCTTCGTCTGCCCGTGAACTCTCATATTACCATTCTGGAGAAG AGGACGGAATATACATATCTTTCGCTGATTTGCGCCCATACACTAGTCAAG
genomic: GAAGCTGTCTTCGTCTGCCCGTGAACTCTCATATTACCATTCTGGAGAAGgtaatgttgc ... cgttgtgcagAGGACGGAATATACATATCTTTCGCTGATTTGCGCCCATACACTAGTCAAG
tccatttggaggaatcctagcaccgtctaaccattatctttcattcgttgtgcagAGGACGGAATATACATATCTTTCGCTGATTTGCGCCCATACACTAGTCAAGACCAAGCATGTACTAAAGTTCTTAGCGAGTGGTTCTCCAAACAATTTGA
gtctaac putative branch site (score: 6)
tctttcattc putative PPT
attatcttt TA-rich tract