1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...agtttcttctttcacgatcttgctttaaaaataacatgaaatgtaaggaaaaagaatttagttattgatgaaggttcaacgatgagtgcattgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTCGCCTTTGAGAAG
species | Physcomitrella patens |
transcript | PP1S9_100V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAG GTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTCEST: gi|208382228|gb|DC914847.1|DC914847
genomic: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAGgttagcgagt ... ttgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTC
EST: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAG GTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTCEST: gi|100358885|gb|BY946737.1|BY946737
genomic: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAGgttagcgagt ... ttgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTC
EST: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAG GTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTCEST: gi|162168015|gb|FC344329.1|FC344329
genomic: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAGgttagcgagt ... ttgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTC
EST: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAG GTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTC
genomic: TGGAGTCATTCACAGATGGAGCACCCTTCACACTTCAGCGCTTTTGTGAGgttagcgagt ... ttgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTC
aggaaaaagaatttagttattgatgaaggttcaacgatgagtgcattgtcaatagGTGTTGTTGAATCCTCGAGACAGGTATCCCAATCTTGACAAGGTTGCCCTCGCCTTTGAGAAG
tattgat putative branch site (score: 2)
aaagaatttagttatt TA-rich tract