1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtcagaatcgttgtcatctgataatatttcctgcgaagattcccgaattattgattattattttaggcattaggcctggaatgagcacatgtctgccaatcttaatgctcacatacttgggttgatttctaatgagctcttcttgtaccatgaaggacagATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCGGATCCAAATCTCGAGAACACTG
species | Physcomitrella patens |
transcript | PP1S99_87V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGACATTGGCTAATGGGGAGAAGCTGACACAGGTCATCAATAAGAATAAG ATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCGEST: gi|100353821|gb|BY983327.1|BY983327
genomic: AGACATTGGCTAATGGGGAGAAGCTGACACAGGTCATCAATAAGAATAAGgtcagaatcg ... tgaaggacagATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCG
EST: AGACATTGGCTAATGGGGAGAAGCTGACACAGGTCATCAATAAGAATAAG ATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCG
genomic: AGACATTGGCTAATGGGGAGAAGCTGACACAGGTCATCAATAAGAATAAGgtcagaatcg ... tgaaggacagATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCG
tgctcacatacttgggttgatttctaatgagctcttcttgtaccatgaaggacagATAAATGTGAAGTATTTGCCCAATGTGAATCTAGGTGTCAACGTTGTTGCGGATCCAAATCTCGAGAACACTG
ttctaat putative branch site (score: 10)
atttctaat TA-rich tract