1 5' 3' | 2 5' 3' |
gtcagctcttgtgactaattttcatgagggtttagacagaagcacttcgcaatctattcatagcttctcactacggtatatgtggtgcagGTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGGGGTCCTCGCTACTTGCACGGTGGCAATGCACTCGTTTGGCTACGAAAATATTCTGACGTGAAGG
species | Physcomitrella patens |
transcript | PP1S98_64V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTCGAACGCATCAACCAAGAG GTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGAGGTCCTCGCTACTTGEST: gi|162166136|gb|FC342586.1|FC342586
genomic: CTCGAACGCATCAACCAAGAGgtcagctctt ... tgtggtgcagGTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGGGGTCCTCGCTACTTG
EST: GGCTACTGCCTGTCCACGTTGAACATGGACTCGAACGCATCAACCAAGAG GTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGAGGTCCTCGCTACTTGEST: gi|37835118|gb|BJ593130.1|BJ593130
genomic: GGCTACTGCCTGTCCACGTTGAACATGGACTCGAACGCATCAACCAAGAGgtcagctctt ... tgtggtgcagGTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGGGGTCCTCGCTACTTG
EST: GAACATGGACTCGAACGCATCAACCAAGAG GTGAGCGAGTGGATGCTGGNCACCAAGGGGTGGAGGGGTCCTCGCTACTTG
genomic: GAACATGGACTCGAACGCATCAACCAAGAGgtcagctctt ... tgtggtgcagGTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGGGGTCCTCGCTACTTG
acagaagcacttcgcaatctattcatagcttctcactacggtatatgtggtgcagGTGAGCGAGTGGATGCTGGGCACCAAGGGGTGGAGGGGTCCTCGCTACTTGCACGGTGGCAATGCACTCGTTTGGCTACGAAAATATTCTGACGTGAAGG
ttctcac putative branch site (score: 4)
aatctatt TA-rich tract