Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtataggaatcatcacatcgaaataacggagcagaatcactctacaagaactcgagaaaaacaaataacagaaatactgtgggtacagGTCAGATGGTCCACCAACCATTCAAGCTGACTCGAACTCACCTGCACAACGAGATTCGTTGACGAAATCTTTAACTCGTGTCTACGAACTCGCCGAAATG

Basic information

species Physcomitrella patens
transcript PP1S98_46V6.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaatcactctacaagaactcgagaaaaacaaataacagaaatactgtgggtacagGTCAGATGGTCCACCAACCATTCAAGCTGACTCGAACTCACCTGCACAACGAGATTCGTTGACGAAATCTTTAACTCGTGTCTACGAACTCGCCGAAATG
                             aaataac  putative branch site (score: 2)
                     agaaaaacaaataa  TA-rich tract