1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gatgagacttcaaattatgttcctttggatctggtttgtcatttgtttaaaattaagccacagaattcaattactaattagtcatttcacttcgtaatagGCAAGTAGGTAAGGGTGTTGGTCAAGCTAAACATCAGTATATCGAAGATGAGCCGAAAATTGACAAGGCTTCAAAGTCGGATGATGCGGCTCCCACGGAT
species | Physcomitrella patens |
transcript | PP1S98_37V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCGGTTATGTTAGACGACAGCGTTGTGGAGTTTCTTAAAGCCAGTGAAAA GCAAGTAGGTAAGGGTGTTGGTCAAGCTAAACATCAGTATATCGAAGATGA
genomic: TCGGTTATGTTAGACGACAGCGTTGTGGAGTTTCTTAAAGCCAGTGAAAAgtacgtgcct ... ttcgtaatagGCAAGTAGGTAAGGGTGTTGGTCAAGCTAAACATCAGTATATCGAAGATGA
tttaaaattaagccacagaattcaattactaattagtcatttcacttcgtaatagGCAAGTAGGTAAGGGTGTTGGTCAAGCTAAACATCAGTATATCGAAGATGAGCCGAAAATTGACAAGGCTTCAAAGTCGGATGATGCGGCTCCCACGGAT
tactaat putative branch site (score: 6)
tttcacttc putative PPT
aattcaattactaatt TA-rich tract