Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagaaatggagccatcaccaatacccaggaatttgcgagcgctgtatgaatatgttgtcactttcttccttaactggtactcatatacgttggcattgtcgaagatggccatggttcctagatggttctgtcagttcgtcttgagtttctggaataacttcgttagGATATGGTGGACGGAGTTGTGACCTCGACGCAAGAGGGACGGAGGTGGAGAGCGCAACAACTCCGGTTGATGATTCACGCTCCCAAGGGCTTACAGACTG

Basic information

species Physcomitrella patens
transcript PP1S98_239V6.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggttcctagatggttctgtcagttcgtcttgagtttctggaataacttcgttagGATATGGTGGACGGAGTTGTGACCTCGACGCAAGAGGGACGGAGGTGGAGAGCGCAACAACTCCGGTTGATGATTCACGCTCCCAAGGGCTTACAGACTG
                                        gaataac  putative branch site (score: 2)
                                              cttcgtt  CT-rich tract
                                         aataactt  TA-rich tract