1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...aaggggcacacagaatactgatgaacgaccgcctctgggttaggcttttgatgtaattggccttttgtctctttttgtcctgtttctttgccgtgaacagGATTATTCTGCAGATGCGGTTCTGGAGATTTTGAAAGGGCTTGTTTCTCAGTTGAATCAAAACCTGTGCTCCAAG
species | Physcomitrella patens |
transcript | PP1S98_192V6.3 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTTATACTTCTTTTGCAAGAATTTTGAGTGCACCGCTCACAGCTCGCAAG GATTATTCTGCAGATGCGGTTCTGGAGATTTTGAAAGGGCTTGTTTCTCAG
genomic: TTTATACTTCTTTTGCAAGAATTTTGAGTGCACCGCTCACAGCTCGCAAGgttagtcaaa ... ccgtgaacagGATTATTCTGCAGATGCGGTTCTGGAGATTTTGAAAGGGCTTGTTTCTCAG
ttttgatgtaattggccttttgtctctttttgtcctgtttctttgccgtgaacagGATTATTCTGCAGATGCGGTTCTGGAGATTTTGAAAGGGCTTGTTTCTCAGTTGAATCAAAACCTGTGCTCCAAG
ttttgat putative branch site (score: 4)
ccttttgtctcttttt putative PPT
atgtaatt TA-rich tract