1 5' 3' | 2 5' 3' |
...agtatccgaatggcacagtagcgggggatcgagtgtgagtgaattatgaggtgtgcgcaagttttctgattgttttttggtcggtgtggattcattgcagTCTGGTCTCATCTACTTCAGGGATTGGAATTCATCGACGCTGACCTACAGAGACCCACGCCAGGCGGTTCCACCTCCCGTGCAGCGCATCGGACTGTTGT
species | Physcomitrella patens |
transcript | PP1S98_171V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGCCGGAGCCGCAGCTCCCCAGTGGTTGGGAAAAATGCCTTGACTTGAAG TCTGGTCTCATCTACTTCAGGGATTGGAATTCATCGACGCTGACCTACAGA
genomic: AGCCGGAGCCGCAGCTCCCCAGTGGTTGGGAAAAATGCCTTGACTTGAAGgtgcacacga ... ttcattgcagTCTGGTCTCATCTACTTCAGGGATTGGAATTCATCGACGCTGACCTACAGA
atgaggtgtgcgcaagttttctgattgttttttggtcggtgtggattcattgcagTCTGGTCTCATCTACTTCAGGGATTGGAATTCATCGACGCTGACCTACAGAGACCCACGCCAGGCGGTTCCACCTCCCGTGCAGCGCATCGGACTGTTGT
ttctgat putative branch site (score: 3)
attgtttttt TA-rich tract