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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ccttataatcgtaataacggttattggaccttatcctggtttgcatctgttatctattactattttctgtaatagttagttttccttgactctgagctacGAATTTTACGAAGATCACACTCACCAGTCGGGGGAAGAATGGTGAAGGTTGCAGCGGAGGCCTGCATGAATGAACTGAAAGCCAAATACCCTGAGCATTT

Basic information

species Physcomitrella patens
transcript PP1S97_256V6.1
intron # 6
splice site 3'
intron type U12 (go to U12 genes for details)


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgttatctattactattttctgtaatagttagttttccttgactctgagctacGAATTTTACGAAGATCACACTCACCAGTCGGGGGAAGAATGGTGAAGGTTGCAGCGGAGGCCTGCATGAATGAACTGAAAGCCAAATACCCTGAGCATTT
                                    ttccttgac  putative branch site 
                                  ttttccttgactct  CT-rich tract
     tatctattactatttt  TA-rich tract