Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggatcggattgcattggaaggttgagttgtgctcttttatgacagtgccttagctcaacactaatttttatgattgaaaggatgctattttttttggcagGTTTTTTAAATTTCAACATGGGAGATCCACTTGTTGCTCCTGCTCTAGTGGGATTTGGTGTGAATCTACTCCTTACGGAAGTAATCCAAGCAGGTAGAAT

Basic information

species Physcomitrella patens
transcript PP1S96_245V6.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgccttagctcaacactaatttttatgattgaaaggatgctattttttttggcagGTTTTTTAAATTTCAACATGGGAGATCCACTTGTTGCTCCTGCTCTAGTGGGATTTGGTGTGAATCTACTCCTTACGGAAGTAATCCAAGCAGGTAGAAT
             cactaat  putative branch site (score: 2)
                                       ctatttttttt  putative PPT
                taatttttatgattga  TA-rich tract