Sequence
atgc intronic sequence ATGC exonic sequence...gtggttacagagataaacgccgcaagttgaataatgtttggttttcgaactgcattcatgtatcttagcattcattgacttgaacgttgatactctacagGGTTTTGCAAGTGATATAATCCTCCCCGAGGAGATTTCTGTGAGTTGATTAACTTGGATCAGCGACATGGGGAACACTAGTTCGAGGGGATCGAGGAAGT
Basic information
species | Physcomitrella patens |
transcript | PP1S96_216V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100449197|gb|CJ973496.1|CJ973496EST: TGTGAACGGGCTGCAAGCTTGGTTTTGGAGCAACGTTGGAGCATTGAAGG GGTTTTGCAAGTGATATAATCCTCCCCGAGGAGATTTCTGTGAGTTGATTA
genomic: TGTGAACGGGCTGCAAGCTTGGTTTTGGAGCAACGTTGGAGCATTGAAGGgttgcgctcg ... tactctacagGGTTTTGCAAGTGATATAATCCTCCCCGAGGAGATTTCTGTGAGTTGATTA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.cgaactgcattcatgtatcttagcattcattgacttgaacgttgatactctacagGGTTTTGCAAGTGATATAATCCTCCCCGAGGAGATTTCTGTGAGTTGATTAACTTGGATCAGCGACATGGGGAACACTAGTTCGAGGGGATCGAGGAAGT
tatctta TA-rich tract