1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...atgcggttttacaagccacctccagagcttttgcgtcgttgttatatgaccttgtaggcgcttttttgtcctcactcgacttgcgtttacttgtctgcagGGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAG
species | Physcomitrella patens |
transcript | PP1S96_115V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACAGGACCCTGGATGTTGGCAGCGCGAAGACACCGGTGGATGAGCGCGAG GGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAGEST: gi|18331392|gb|BJ163403.1|BJ163403
genomic: ACAGGACCCTGGATGTTGGCAGCGCGAAGACACCGGTGGATGAGCGCGAGgtgatccctt ... ttgtctgcagGGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAG
EST: ACAGGACCCTGGATGTTGGCAGCGCGAAGACACCGGTGGATGAGCGCGAG GGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAG
genomic: ACAGGACCCTGGATGTTGGCAGCGCGAAGACACCGGTGGATGAGCGCGAGgtgatccctt ... ttgtctgcagGGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAG
atgaccttgtaggcgcttttttgtcctcactcgacttgcgtttacttgtctgcagGGGATTCCACACCATCTAATTGACATCGTTGATCCTTCTCAAG
tcctcac putative branch site (score: 2)
tttactt putative PPT
ttttttgt TA-rich tract