1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...aaaatgtagaaatcacagatgttatgcccttgcttttggaatattgcggaggcgttttgtgttgaaatcaattgtaagattgatgcggataactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCATTTGCGGCGCACACATGGCAAGGTTCTCGTTATGGCGTCTACTGCGAGCT
species | Physcomitrella patens |
transcript | PP1S94_158V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTG GACACNACATTCTGGGGTCAAGTGTACATGACGTACTTTGCA-TTCCGCATEST: gi|208358411|gb|DC930740.1|DC930740
genomic: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTGgtaaaactgg ... aactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCAT
EST: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTG GACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATCCCGCATEST: gi|162231564|gb|FC408209.1|FC408209
genomic: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTGgtaaaactgg ... aactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCAT
EST: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTG GACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCATEST: gi|100434977|gb|BY960899.1|BY960899
genomic: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTGgtaaaactgg ... aactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCAT
EST: GATTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTG GACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCAT
genomic: GCTTCTTCTTTAGCGAGACAAAGGATTTGAAGGCGCTGACATCAACTTTGgtaaaactgg ... aactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCAT
gcggaggcgttttgtgttgaaatcaattgtaagattgatgcggataactcaacagGACACAACATTCTGGGGTCAAGTGTACATGACGTACTTTGCAATTCCGCATTTGCGGCGCACACATGGCAAGGTTCTCGTTATGGCGTCTACTGCGAGCT
ggataac putative branch site (score: 7)
aaatcaatt TA-rich tract