1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...atccttgaataaaataattctgggatatctacaattctaagcgtcgcagagcttatgttgtatttaacagagttaaattccgttatgatgccctttgcagAAGGCAGACCCGACAACACTGGAGCGGAGATGGCAAAGGAGCTTGTTCCGGCGGGGATACCTGTTACATTAGTCCTGGATTCAGGTGTAGCATACGTGAT
species | Physcomitrella patens |
transcript | PP1S93_65V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GCTCAAGCTTGCAGCTTCTGAGGGTAAAGATTTTAATGTTATCTGCACAG AAGGCAGACCCGACAACACTGGAGCGGAGATGGCAAAGGAGCTTGTTCCGG
genomic: GCTCAAGCTTGCAGCTTCTGAGGGTAAAGATTTTAATGTTATCTGCACAGgtatcactta ... ccctttgcagAAGGCAGACCCGACAACACTGGAGCGGAGATGGCAAAGGAGCTTGTTCCGG
gcagagcttatgttgtatttaacagagttaaattccgttatgatgccctttgcagAAGGCAGACCCGACAACACTGGAGCGGAGATGGCAAAGGAGCTTGTTCCGGCGGGGATACCTGTTACATTAGTCCTGGATTCAGGTGTAGCATACGTGAT
atttaac putative branch site (score: 3)
tgcccttt putative PPT
ttatgttgtatttaa TA-rich tract