1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tggaaagactcggcggcgcaggcaacacaacttcttattggactcccttgatggaaatggattcattttcttgatatgtgtacgtttgtgtatgtgacagTGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAGCATATCACCCGGACAGAATCGTATTCTATTACTTCCCACCTATACGAAG
species | Physcomitrella patens |
transcript | PP1S93_56V6.4 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AATCATGATAACTTTGGAGAGTTTACAAGGAATCTGTGACGAATCCCCAG TGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAGEST: gi|100426475|gb|BY958917.1|BY958917
genomic: AATCATGATAACTTTGGAGAGTTTACAAGGAATCTGTGACGAATCCCCAGgtgggaagta ... tatgtgacagTGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAG
EST: AATCATGATAACTTTGGAGAGTTTACAAGGAATCTGTGACGAATCCCCAG TGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAG
genomic: AATCATGATAACTTTGGAGAGTTTACAAGGAATCTGTGACGAATCCCCAGgtgggaagta ... tatgtgacagTGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAG
ccttgatggaaatggattcattttcttgatatgtgtacgtttgtgtatgtgacagTGTTGAACTCCGAGACGACCCAGTTTTAAAAGAAAGGGGATGAGGCAGGAGCATATCACCCGGACAGAATCGTATTCTATTACTTCCCACCTATACGAAG
tcttgat putative branch site (score: 4)
attcatttt TA-rich tract