Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgtaaacctatagttttttagccaactcgtaatatatcacagttcatcttccttttaaaatgatatcaattttatattgatgaactcctcaatgtttcagGTTTCAATTGGATTGCATTGTATCCTTTGTAA

Basic information

species Physcomitrella patens
transcript PP1S93_192V6.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atcttccttttaaaatgatatcaattttatattgatgaactcctcaatgtttcagGTTTCAATTGGATTGCATTGTATCCTTTGTAA
                             tattgat  putative branch site (score: 3)
                                       ctcctca  putative PPT
       ttttaaaatgatatca  TA-rich tract