1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatatcttatgcgcttgctgttgctattactcgtcgtagaagtgcatcagttactgaagtgttatcacgggtgcagcttgacatctttctactgcctatgttgaaattatgttttttagagttcttgtgctgactagtggtcttgtctggtttgtagGCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGTGAAAATCGACTCGAGAAACAGAGACAAGATATTCAGCAG
species | Physcomitrella patens |
transcript | PP1S92_100V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GAAACAGCAGGNTGAGAAAACCGCTCGAGATATTCAG GCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGTEST: gi|162253640|gb|FC430378.1|FC430378
genomic: GAAACAGCAGGTTGAGAAAACCGCTCGAGATATTCAGgtatatctta ... tggtttgtagGCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGT
EST: CTGCTCATCGTCGGAAACAGCAGGTTGAGAAAACCGCTCGAGATATTCAG GCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGT
genomic: CTGCTCATCGTCGGAAACAGCAGGTTGAGAAAACCGCTCGAGATATTCAGgtatatctta ... tggtttgtagGCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGT
gaaattatgttttttagagttcttgtgctgactagtggtcttgtctggtttgtagGCAACAGCAATTCAGCGGATTTTAGGACAAGACTCTACTAGGAAAAGGCGTGAAAATCGACTCGAGAAACAGAGACAAGATATTCAGCAG
tgctgac putative branch site (score: 3)
tcttgtct putative PPT
tatgtttttta TA-rich tract