1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...gtgacaaagtgaaatgaatcagagtgatgctattgtaagcatacatggctttttggttcgctttccatgttttgacgagattggtactgcgtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTACGCACACAGTAAATCTTGGAATGCTATTGACCATTGGAAACGCCTGAAA
species | Physcomitrella patens |
transcript | PP1S91_220V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTG GTGGAATATTGTCGATTCTGTGGTTCTGCAGGAGCACACTCA-CAGTATTAEST: gi|208399001|gb|DC912160.1|DC912160
genomic: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTGgtatgcctcc ... gtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTA
EST: GCTCGGCGCAAGCTTGNAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTG GTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTAEST: gi|100396583|gb|BY990197.1|BY990197
genomic: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTGgtatgcctcc ... gtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTA
EST: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTG GTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTAEST: gi|162151698|gb|FC327827.1|FC327827
genomic: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTGgtatgcctcc ... gtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTA
EST: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTG GTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTA
genomic: GCTCGGCGCAAGCTTGCAGATGCGGCAGTCATGTCCAAAGCGTTTGGCTGgtatgcctcc ... gtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTA
tggctttttggttcgctttccatgttttgacgagattggtactgcgtagaaacagGTGGAATATTGTCGATTCTGTGGTTCTGCAAGAGCACACTCAACAGTATTACGCACACAGTAAATCTTGGAATGCTATTGACCATTGGAAACGCCTGAAA
ttttgac putative branch site (score: 20)
atgtttt TA-rich tract