1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagtgggaggtggtgatttggggtggagtacgtcttgatcgctggtgcattgaggagctcgctcgaggaggtggttagtttcgtgggttcgaggagttggggaccctggcgaaattattagggctcagggtttagaagttgtatcatttcgacgatttgatgggagggcctggtttgtgtggcagTGACTTGGTATATTTGCGGGCCAACTGTGTACGACTCGTCCCACATCGGACACGCCAGGAATTATGTCACGTTTGATATCATACGTTGAATACTTGAG
species | Physcomitrella patens |
transcript | PP1S83_57V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTTGGCTAAGGAGAAAGTGCCATTCGTCACTAAGGACGGATCTAGAAACG TGACTTGGTATATTTGCGGGCCAACTGTGTACGACTCGTCCCACATCGGAC
genomic: TTTGGCTAAGGAGAAAGTGCCATTCGTCACTAAGGACGGATCTAGAAACGgtgagtggga ... tgtgtggcagTGACTTGGTATATTTGCGGGCCAACTGTGTACGACTCGTCCCACATCGGAC
tttagaagttgtatcatttcgacgatttgatgggagggcctggtttgtgtggcagTGACTTGGTATATTTGCGGGCCAACTGTGTACGACTCGTCCCACATCGGACACGCCAGGAATTATGTCACGTTTGATATCATACGTTGAATACTTGAG
atttgat putative branch site (score: 5)
tatcattt TA-rich tract