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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gtattggtggttacaaatcaacagactgtgaatatgtaaggtttgtttgaaggtccttgcatcgattcattgagtcataacttttctttcgattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGATGCAGTCGAGTCTTGCTCCCTGTTTTCGTTTCATAAATGAAAAGTTATTG

Basic information

species Physcomitrella patens
transcript PP1S83_247V6.2
intron # 1
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18325016|gb|BJ157012.1|BJ157012
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722249|gb|BJ972508.1|BJ972508
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162207386|gb|FC383943.1|FC383943
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|7046847|gb|AW476791.1|AW476791
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67728277|gb|BJ978536.1|BJ978536
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716178|gb|BJ966438.1|BJ966438
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37833643|gb|BJ591655.1|BJ591655
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162254082|gb|FC429398.1|FC429398
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|19789207|gb|BQ041167.1|BQ041167
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67719699|gb|BJ969958.1|BJ969958
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162231405|gb|FC406828.1|FC406828
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|15327096|gb|BI487573.1|BI487573
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|7067428|gb|AW497283.1|AW497283
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTT
EST: gi|162206428|gb|FC383421.1|FC383421
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722950|gb|BJ973209.1|BJ973209
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722430|gb|BJ972689.1|BJ972689
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162213001|gb|FC389217.1|FC389217
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162210196|gb|FC386707.1|FC386707
EST:     GAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: GAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|15727499|gb|BI740322.1|BI740322
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722329|gb|BJ972588.1|BJ972588
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67724696|gb|BJ974955.1|BJ974955
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162237928|gb|FC412529.1|FC412529
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67719169|gb|BJ969428.1|BJ969428
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67720336|gb|BJ970595.1|BJ970595
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67704435|gb|BJ964668.1|BJ964668
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162210983|gb|FC387081.1|FC387081
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162216869|gb|FC392219.1|FC392219
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37851128|gb|BJ609136.1|BJ609136
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67725410|gb|BJ975669.1|BJ975669
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37829771|gb|BJ587783.1|BJ587783
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67721611|gb|BJ971870.1|BJ971870
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162214246|gb|FC390292.1|FC390292
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716849|gb|BJ967108.1|BJ967108
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18356702|gb|BJ188761.1|BJ188761
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162231406|gb|FC406829.1|FC406829
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162210197|gb|FC386708.1|FC386708
EST:     GAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: GAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162221192|gb|FC397833.1|FC397833
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67725462|gb|BJ975721.1|BJ975721
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37822790|gb|BJ580856.1|BJ580856
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162237929|gb|FC412530.1|FC412530
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162230404|gb|FC407072.1|FC407072
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722557|gb|BJ972816.1|BJ972816
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162202815|gb|FC379797.1|FC379797
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162206427|gb|FC383420.1|FC383420
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67709687|gb|BJ965503.1|BJ965503
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67725447|gb|BJ975706.1|BJ975706
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162277145|gb|FC453367.1|FC453367
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67699319|gb|BJ959552.1|BJ959552
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162274786|gb|FC450826.1|FC450826
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162220128|gb|FC397047.1|FC397047
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716929|gb|BJ967188.1|BJ967188
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67727963|gb|BJ978222.1|BJ978222
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67722401|gb|BJ972660.1|BJ972660
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18366104|gb|BJ198182.1|BJ198182
EST:     CGTAGAGAGCTCGGAAAGCTGAGGAGGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: CGTAGAGAGCTCGGAAAGCTGAGGAGGG-AGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|6102441|gb|AW126911.1|AW126911
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162224685|gb|FC401933.1|FC401933
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716892|gb|BJ967151.1|BJ967151
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|100385946|gb|BY951140.1|BY951140
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAAAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162216870|gb|FC392220.1|FC392220
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37846478|gb|BJ604486.1|BJ604486
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|7148031|gb|AW509953.1|AW509953
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGAAGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162220723|gb|FC395492.1|FC395492
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162207387|gb|FC383944.1|FC383944
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716942|gb|BJ967201.1|BJ967201
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18332987|gb|BJ165001.1|BJ165001
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67723763|gb|BJ974022.1|BJ974022
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67720020|gb|BJ970279.1|BJ970279
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162221191|gb|FC397832.1|FC397832
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67716771|gb|BJ967031.1|BJ967031
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37830991|gb|BJ589003.1|BJ589003
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|7286970|gb|AW599457.1|AW599457
EST:     TCGTAGAGAGCTCGGATAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTT
EST: gi|162238672|gb|FC418203.1|FC418203
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37822999|gb|BJ581065.1|BJ581065
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|7582880|gb|AW698985.1|AW698985
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67725367|gb|BJ975626.1|BJ975626
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|15327079|gb|BI487555.1|BI487555
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18343807|gb|BJ175845.1|BJ175845
EST:     CGTAGAGAGCTCGGAAAGCTGAGGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: CGTAGAGAGCTCGGAAAGCTGAGG-AGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18337791|gb|BJ169815.1|BJ169815
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCCGCATGGGAGTTA
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCC-GCATGGGAGTTA
EST: gi|22133443|gb|BQ827739.1|BQ827739
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|67718698|gb|BJ968957.1|BJ968957
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37842273|gb|BJ600281.1|BJ600281
EST:     TCGTAGAGAGCTCGGAAANCTGAGGAGGGAGAAGGCCTAGAATGCATNTG                         GGANNGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162202816|gb|FC379798.1|FC379798
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|162214245|gb|FC390291.1|FC390291
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|37840575|gb|BJ598583.1|BJ598583
EST:     TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
genomic: TCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGAT
EST: gi|18365071|gb|BJ197145.1|BJ197145
EST:     CGTAGAGAGCTCGGAAAGCTGAGGAGGGGAGAAGGCCTAGAATGCATCTG                         GGATTGACGATATTGTACACTTCCGA
genomic: CGTAGAGAGCTCGGAAAGCTGAGGAGGG-AGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 35 (downstream exon)
Score: 209

TTCGACCGCTTCAAGGTTATGGTGGCGCGTGTCAAGAGGAGTTCCATTGTTCGTAGAGAGCTCGGAAAGCTGAGGAGGGAGAAGGCCTAGAATGCATCTGgtacattcct ... gattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGATGCAGTCGAGTCTTGCTCCCTGTTTTCGTTTCATAAATGAAAAGTTATTG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgaaggtccttgcatcgattcattgagtcataacttttctttcgattgtgcagGGATTGACGATATTGTACACTTCCGAATAGCCCTCCGCATGGGAGTTAGATGCAGTCGAGTCTTGCTCCCTGTTTTCGTTTCATAAATGAAAAGTTATTG
                             tcataac  putative branch site (score: 209)
                                   cttttctttcgatt  CT-rich tract
                               ataactttt  TA-rich tract