1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgagattttaacgatcgctagcacattgtcatttgtaaagcgtaaagactcatcaactctggaaggaagtaaggtctgcgtattcgtttatttatgtggatgtgtatgcattcacggaaagctgatgtgaaaatgatgatggttgtctgcagTTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAGCCGACCGGCGGAGCGCTACCGGGTGCGGGAAAAGACTAATACATCCGCC
species | Physcomitrella patens |
transcript | PP1S77_215V6.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTGGAAGGCTTGAATGCCACCATAATTGGACTCGGTTGCATTCTCGGCTG TTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAGEST: gi|162174067|gb|FC350582.1|FC350582
genomic: GTGGAAGGCTTGAATGCCACCATAATTGGACTCGGTTGCATTCTCGGCTGgtgagatttt ... ttgtctgcagTTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAG
EST: GTGGAAGGCTTGAATGCCACCATAATTGGACTCGGTTGCATTCTCGGCTG TTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAG
genomic: GTGGAAGGCTTGAATGCCACCATAATTGGACTCGGTTGCATTCTCGGCTGgtgagatttt ... ttgtctgcagTTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAG
ggatgtgtatgcattcacggaaagctgatgtgaaaatgatgatggttgtctgcagTTTTGCCTCTGGTTTGGCTGCAGCGTTTTTCGCCTCTGGCAGCGCACTGAGCCGACCGGCGGAGCGCTACCGGGTGCGGGAAAAGACTAATACATCCGCC
agctgat putative branch site (score: 4)
aaaatgat TA-rich tract