1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtacggggacccaaccgattgacttgaattggttacgagtgtatgatatatgcatttcatctcggttagtgaaaattttatggagctggtatgatattgttactcattatcatactcacatgtacttaagaacttgtttctggatctcactgcacatttttgtcattggactatcatgttacagGCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCTGAGGGAGGTTATGTAAAAGGTTTTGTTGGCAATCCTTTGTGCGATCCTC
species | Physcomitrella patens |
transcript | PP1S69_69V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGGGTACTCTCCTCCTTGGAGCACTCAAAGCCGATGCAGAAACTGTTCAG GCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCTEST: gi|162278450|gb|FC454536.1|FC454536
genomic: TGGGTACTCTCCTCCTTGGAGCACTCAAAGCCGATGCAGAAACTGTTCAGgtacggggac ... catgttacagGCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCT
EST: TGGGTACTCTCCTCCTTGGAGCACTCAAAGCCGATGCAGAAACTGTTCAG GCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCT
genomic: TGGGTACTCTCCTCCTTGGAGCACTCAAAGCCGATGCAGAAACTGTTCAGgtacggggac ... catgttacagGCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCT
gaacttgtttctggatctcactgcacatttttgtcattggactatcatgttacagGCGCTCTTCTTAGGAGATGGTCCACTAGGACAGATGACTGCAATATCCTCTGAGGGAGGTTATGTAAAAGGTTTTGTTGGCAATCCTTTGTGCGATCCTC
atctcac putative branch site (score: 5)
acattttt TA-rich tract