Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|37842150|gb|BJ600158.1|BJ600158EST: ATGTTCCAGCCCTGAATTGGAACGACACGTCGTCGAGTTTTGTACTTCAA TAATCCGAGATGGGGAAACTCGAATTTGAGTGGACTGCGAAAGACTGCGCC
genomic: ATGTTCCAGCCCTGAATTGGAACGACACGTCGTCGAGTTTTGTACTTCAAgtgagccaac ... gttttggcagTAATCCGAGATGGGGAAACTCGAATTTGAGTGGACTGCGAAAGACTGCGCC
EST:
gi|18364946|gb|BJ197020.1|BJ197020EST: ATGTTCCAGCCCTGAATTGGAACGACACGTCGTCGAGTTTTGTACTTCAA TAATCCGAGATGGGGAAACTCGAATTTGAGTGGACTGCGAAAGACTGCGCC
genomic: ATGTTCCAGCCCTGAATTGGAACGACACGTCGTCGAGTTTTGTACTTCAAgtgagccaac ... gttttggcagTAATCCGAGATGGGGAAACTCGAATTTGAGTGGACTGCGAAAGACTGCGCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ttccttcttaagtcatcctgcgagtgtcgaccattctgttatctgtgcatctgtgaaagtcacgtatgcaatcatgaagtggatctcttggttttggcagTAATCCGAGATGGGGAAACTCGAATTTGAGTGGACTGCGAAAGACTGCGCCCCAGAGCGATGCATGAGAATCGCATCAAACATGGACTTGATCTTCCCCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA