Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtacaaacatgtgttttccttggtgcacttaactcgccagcagcaatgggttggactaggaaaactaattgagaaaaatatcgtgcaatgcagATCCGCAGACAGGACACAGGTTGGCGATGGACACAAACTTGGAAACGGCAGTTGATTCCCTGGTATACCAGTCAGGGCCCTGACGTGCCTGAGGTCGCTA

Basic information

species Physcomitrella patens
transcript PP1S62_175V6.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agcagcaatgggttggactaggaaaactaattgagaaaaatatcgtgcaatgcagATCCGCAGACAGGACACAGGTTGGCGATGGACACAAACTTGGAAACGGCAGTTGATTCCCTGGTATACCAGTCAGGGCCCTGACGTGCCTGAGGTCGCTA
                        aactaat  putative branch site (score: 2)
                      aaaactaattgagaaa  TA-rich tract