Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18326735|gb|BJ158734.1|BJ158734EST: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAG GTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
genomic: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAGgtgcgatcac ... ggtgcagcagGTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
EST:
gi|67716807|gb|BJ967066.1|BJ967066EST: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAG GTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
genomic: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAGgtgcgatcac ... ggtgcagcagGTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
EST:
gi|100387072|gb|BY951471.1|BY951471EST: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAG GTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
genomic: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAGgtgcgatcac ... ggtgcagcagGTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
EST:
gi|100405730|gb|BY973825.1|BY973825EST: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAG GTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
genomic: GATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAGgtgcgatcac ... ggtgcagcagGTTGCAGAACTTTTTAGCAGTTAAGTCTTGAAAACAGCAAGATGCCGGCCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACACTGACTTGCATTTCAGATTCCGACACAATTTCGTTTTGCTTGACGTGGATGAGTGAGTGATTAATTTCAGGAACGTGCTGCCCACTCCGAGTAACAGgtgcgatcacacactgaacttgtagttctcgctcccatcagctcacttgtccccgttccaccttttccgttgcatatttgtactggctcgtaggattgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC