1 5' 3' | 2 5' 3' |
...gctatcttgagtgattaagactcggtaagtctgggcaactgtggtgtcttggagttgtgcctactgagattaatgttttccaactgcttgcatgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGGGTGTCCTAACCAGCAAATATGTGCTACTGCTCCTAAAGGACCAGATCC
species | Physcomitrella patens |
transcript | PP1S61_191V6.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAAC ATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGEST: gi|100389931|gb|BY971283.1|BY971283
genomic: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAACgtaagtttgt ... catgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
EST: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAAC ATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGEST: gi|208389876|gb|DC937707.1|DC937707
genomic: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAACgtaagtttgt ... catgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
EST: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAAC ATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGEST: gi|100436255|gb|BY961125.1|BY961125
genomic: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAACgtaagtttgt ... catgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
EST: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAAC ATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGEST: gi|100411911|gb|BY992401.1|BY992401
genomic: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAACgtaagtttgt ... catgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
EST: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAAC ATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
genomic: AAAAACGGAGGATGCTCCTGTTGGAGCGGTCCCCGAGGATGCGAATCAACgtaagtttgt ... catgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGG
gtcttggagttgtgcctactgagattaatgttttccaactgcttgcatgaaccagATTGTCCTGGGACGGAGGCTGAACAGGCCGGGAAAGCGTCAGCATGCGAGGGGTGTCCTAACCAGCAAATATGTGCTACTGCTCCTAAAGGACCAGATCC
gattaat putative branch site (score: 3)
attaatgtttt TA-rich tract