Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTG T
genomic: CTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgt ... acagtttcag-
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGCGAAGATGCAAACAATGCAACTGATCGGAAAGTGGAGGGGCGATTCCCTGGCTATCATGAGGATGTTACTGGTGCTGCCCACAAGCTGGCTCCTGTGgtaagcgtgtgtggttaggtttccgaatagaagaccccaatttgatttgtatacatatagtgtggctggaagtggatttgggaagggagttcgattaact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG