Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100361477|gb|BY984025.1|BY984025EST: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAG GCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
genomic: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAGgtaatacagt ... ggatgtgcagGCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
EST:
gi|208397498|gb|DC908318.1|DC908318EST: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAG GCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
genomic: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAGgtaatacagt ... ggatgtgcagGCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
EST:
gi|18351960|gb|BJ184012.1|BJ184012EST: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAG GCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
genomic: CCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAGgtaatacagt ... ggatgtgcagGCGGAGTGAAGACTGAAGTGAAAGCAGACAATCCAGGAGGTTGGGGATCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTTCAGGTGAATGCATCCACCAAGGTACGAAGCCAGAGTGATCGTTACATTCGTGGTTCAAATAAATTTTCCAGGTCTGAAGgtaatacagtaaaccgtgtgtcgtttagttctgtaactaccatccttcaactgaaggaaccacgcttactttgagatgatttgacatacactgcatttggatgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG