1 5' 3' | 2 5' 3' | 3 5' 3' |
...gccatcttgagtgattaagactctgtaagtctgagcaactgtggtatcttggagttgtaccaactgagattgatgttttccaattgcttgtatgaaacagATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACCTCTTTCTCTTCCTCCCCCATTTGTGCCACCAAAATTGTTTTGCGGGCTG
species | Physcomitrella patens |
transcript | PP1S61_135V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGAAGATGCTCCTG-TGGAGCGGTCCCCGAGGACGCGAATCAAC AATGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
genomic: CGGAAGATGCTCCTGTTGGAGCGGTCCCCGAGGACGCGAATCAACgtaagtttgt ... tatgaaacagATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
atcttggagttgtaccaactgagattgatgttttccaattgcttgtatgaaacagATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACCTCTTTCTCTTCCTCCCCCATTTGTGCCACCAAAATTGTTTTGCGGGCTG
gattgat putative branch site (score: 2)
atgtttt TA-rich tract