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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgatcaccagcccttgtctttctctctcccgctaatacaaatgctttattcatcaactgtcggtatggtgattcactcgtgtcaccgatccgcgcatagaaagcttactacagtcgattttggttgggtgtttgcgttcggacagGTATCCGAAGGTGACTGCATGGCATCTGATGATGGGGATGAACCTGTGGGGTGCCCTGTATATGTGCCTGTTTATGTTTCTGGTGCCGGGTGGGGGAGGC

Basic information

species Physcomitrella patens
transcript PP1S61_115V6.1
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgcgcatagaaagcttactacagtcgattttggttgggtgtttgcgttcggacagGTATCCGAAGGTGACTGCATGGCATCTGATGATGGGGATGAACCTGTGGGGTGCCCTGTATATGTGCCTGTTTATGTTTCTGGTGCCGGGTGGGGGAGGC
           agcttac  putative branch site (score: 3)
     atagaaa  TA-rich tract