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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cactttagacacctgacgttgggccatagtccgtgcgagttatggaaaaacaccgtctcggagaaggatgtactgaaggaatgtattggaaatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGAGAATACCGTCTTCGAACCCAAAGGTGGAAAGATGGAAGACTCCATTCGT

Basic information

species Physcomitrella patens
transcript PP1S56_136V6.1
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162209755|gb|FC385689.1|FC385689
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162209481|gb|FC386114.1|FC386114
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162203922|gb|FC380214.1|FC380214
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162232954|gb|FC407555.1|FC407555
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|18327216|gb|BJ159218.1|BJ159218
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGC
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGC
EST: gi|162228646|gb|FC405466.1|FC405466
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162277625|gb|FC453256.1|FC453256
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15729971|gb|BI741588.1|BI741588
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15261910|gb|BI437220.1|BI437220
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGCTGCCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|100424662|gb|BY976752.1|BY976752
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15327324|gb|BI487919.1|BI487919
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162203921|gb|FC380213.1|FC380213
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|208378284|gb|DC918905.1|DC918905
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162220840|gb|FC395817.1|FC395817
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162232580|gb|FC408923.1|FC408923
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|208344452|gb|DC905013.1|DC905013
EST:     GACGAAGGANGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAA
EST: gi|15727879|gb|BI740509.1|BI740509
EST:     GTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162247665|gb|FC421708.1|FC421708
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|100390770|gb|BY989253.1|BY989253
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162205589|gb|FC380725.1|FC380725
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162211582|gb|FC387662.1|FC387662
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162218828|gb|FC394371.1|FC394371
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162205590|gb|FC380726.1|FC380726
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162267354|gb|FC442142.1|FC442142
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|18335492|gb|BJ167512.1|BJ167512
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162212700|gb|FC388812.1|FC388812
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162200878|gb|FC377073.1|FC377073
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162161599|gb|FC339014.1|FC339014
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162215115|gb|FC391572.1|FC391572
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162204506|gb|FC381929.1|FC381929
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|67697916|gb|BJ958149.1|BJ958149
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|208396600|gb|DC915912.1|DC915912
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162220841|gb|FC395818.1|FC395818
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162240943|gb|FC415222.1|FC415222
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162278886|gb|FC454937.1|FC454937
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|19789441|gb|BQ041311.1|BQ041311
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAG
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAG
EST: gi|162234646|gb|FC410392.1|FC410392
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162209482|gb|FC386115.1|FC386115
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|100449365|gb|CJ973664.1|CJ973664
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162250012|gb|FC427113.1|FC427113
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|37850512|gb|BJ608520.1|BJ608520
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162243143|gb|FC416743.1|FC416743
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|37836226|gb|BJ594234.1|BJ594234
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|7648116|gb|AW739099.1|AW739099
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|37827384|gb|BJ585396.1|BJ585396
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162246092|gb|FC424412.1|FC424412
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162211583|gb|FC387663.1|FC387663
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|18374545|gb|BJ206123.1|BJ206123
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGC
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGC
EST: gi|162243144|gb|FC416744.1|FC416744
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162200877|gb|FC377072.1|FC377072
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162277624|gb|FC453255.1|FC453255
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162270149|gb|FC446225.1|FC446225
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162247666|gb|FC421709.1|FC421709
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|6166889|gb|AW145153.1|AW145153
EST:     ATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: ATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162220455|gb|FC395992.1|FC395992
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162237583|gb|FC413653.1|FC413653
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162242504|gb|FC419185.1|FC419185
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|18340608|gb|BJ172636.1|BJ172636
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162240942|gb|FC415221.1|FC415221
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162205988|gb|FC382773.1|FC382773
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162242505|gb|FC419186.1|FC419186
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162220454|gb|FC395991.1|FC395991
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15261739|gb|BI437049.1|BI437049
EST:     TTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: TTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162249704|gb|FC426818.1|FC426818
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162205480|gb|FC381578.1|FC381578
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15728986|gb|BI741079.1|BI741079
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGA
EST: gi|162209756|gb|FC385690.1|FC385690
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15727937|gb|BI740538.1|BI740538
EST:     GTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162154110|gb|FC330553.1|FC330553
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162219213|gb|FC396652.1|FC396652
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162234647|gb|FC410393.1|FC410393
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15729229|gb|BI741209.1|BI741209
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162237584|gb|FC413654.1|FC413654
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162210290|gb|FC386749.1|FC386749
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|6167315|gb|AW145579.1|AW145579
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|37830080|gb|BJ588092.1|BJ588092
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|19786133|gb|BQ040442.1|BQ040442
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162270148|gb|FC446224.1|FC446224
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162212701|gb|FC388813.1|FC388813
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|7207463|gb|AW561464.1|AW561464
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162232579|gb|FC408922.1|FC408922
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162262284|gb|FC437195.1|FC437195
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162206370|gb|FC382648.1|FC382648
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|208352493|gb|DC902068.1|DC902068
EST:     GACNAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGANAAAAACGACACCTCNTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15261156|gb|BI436466.1|BI436466
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162232955|gb|FC407556.1|FC407556
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162219212|gb|FC396651.1|FC396651
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|67574498|gb|BJ947322.1|BJ947322
EST:     ACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: ACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162253222|gb|FC429158.1|FC429158
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|15728184|gb|BI740661.1|BI740661
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAGTTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGATAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|18350756|gb|BJ182807.1|BJ182807
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAA
EST: gi|162161600|gb|FC339015.1|FC339015
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|37848656|gb|BJ606664.1|BJ606664
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162204507|gb|FC381930.1|FC381930
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162215114|gb|FC391571.1|FC391571
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162205987|gb|FC382772.1|FC382772
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
EST: gi|162278885|gb|FC454936.1|FC454936
EST:     GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAG                         GAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA
genomic: GACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 35 (downstream exon)
Score: 14

GCATAGTGTGCTACATCAGCAAGGAAGGCGAGGTGACTTGTGAAGGTTGGGACGAAGGAGGTCACTTTCAACCTGAGCCACAGAATCAATTCACCTTGAGgtcagtaacg ... aatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGAGAATACCGTCTTCGAACCCAAAGGTGGAAAGATGGAAGACTCCATTCGT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaaacaccgtctcggagaaggatgtactgaaggaatgtattggaaatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGAGAATACCGTCTTCGAACCCAAAGGTGGAAAGATGGAAGACTCCATTCGT
                                  aatgtatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cactttagacacctgacgttgggccatagtccgtgcgagttatggaaaaacaccgtctcggagaaggatgtactgaaggaatgtattggaaatcacgcagGAAGAGAAAAACGACACCTCGTGCTGTGCAAAGCCGAGGAGAAGTTGTCGAGAATACCGTCTTCGAACCCAAAGGTGGAAAGATGGAAGACTCCATTCGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA