1 5' 3' | 2 5' 3' |
gtggattttctcttttgactttttgtgcgtgccgtgtcgtggatgcggaggcacttagttcccagaacatgaacttttgttcagatgcggttccgaacactctatgcagacgtggttttcttgcggctcttttaatcaacattgtgtttttttcgtttctttcatgatgctcactcttggtaatgaaattttgtctacagGTTGGAGTGATGGAGATGAAAGGTGCGATCGAGAGTACTGGAGGTTTGATTGTTTTGGCTGAGAGTTTCGGACACTCGGTGTTCAAAGATTCCTTCAAGC
species | Physcomitrella patens |
transcript | PP1S55_55V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCGTTTCACAAGGGCACGTTCTCGATGTATTTGCTTGTGCGGTAGATCAG GTTGGAGTGATGGAGATGAAAGGTGCGATCGAGAGTACTGGAGGTTTGATT
genomic: TCGTTTCACAAGGGCACGTTCTCGATGTATTTGCTTGTGCGGTAGATCAGgtggattttc ... ttgtctacagGTTGGAGTGATGGAGATGAAAGGTGCGATCGAGAGTACTGGAGGTTTGATT
gtttttttcgtttctttcatgatgctcactcttggtaatgaaattttgtctacagGTTGGAGTGATGGAGATGAAAGGTGCGATCGAGAGTACTGGAGGTTTGATTGTTTTGGCTGAGAGTTTCGGACACTCGGTGTTCAAAGATTCCTTCAAGC
tgctcac putative branch site (score: 4)
ttttgtct putative PPT
taatgaaattttgt TA-rich tract