1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...attatagtgaagggaaaacattcagggaacttgttgagtgatttcatgctcttgctgacgcttactaaaattttatgaacttttctctggaatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAATCTCGCTGCCCCGAGCGCTTGCCTACATGATCGCGCAGTGCTTAGGAGC
species | Physcomitrella patens |
transcript | PP1S55_301V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100367803|gb|BY984790.1|BY984790
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100444954|gb|BY982782.1|BY982782
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|18327139|gb|BJ159140.1|BJ159140
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACCGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|18363932|gb|BJ196004.1|BJ196004
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGEST: gi|100446330|gb|CJ970629.1|CJ970629
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCG
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100380353|gb|BY986670.1|BY986670
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100450809|gb|CJ974450.1|CJ974450
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100385719|gb|BY987784.1|BY987784
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCANAAEST: gi|18342754|gb|BJ174789.1|BJ174789
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100450101|gb|CJ974094.1|CJ974094
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|67720457|gb|BJ970716.1|BJ970716
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|18326909|gb|BJ158909.1|BJ158909
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|208391222|gb|DC933511.1|DC933511
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100416508|gb|BY975423.1|BY975423
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100436853|gb|BY979558.1|BY979558
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGGCT-GCTGTTGGCACGCAAAEST: gi|162179614|gb|FC355256.1|FC355256
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGG-CTTGCTGTTGGCACGCAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|208352340|gb|DC906151.1|DC906151
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100441166|gb|BY980787.1|BY980787
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|162181259|gb|FC357041.1|FC357041
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100438936|gb|BY961878.1|BY961878
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|18359721|gb|BJ191782.1|BJ191782
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|208377070|gb|DC910844.1|DC910844
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|162181095|gb|FC357267.1|FC357267
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|18372638|gb|BJ204240.1|BJ204240
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100356719|gb|BY965246.1|BY965246
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100442334|gb|BY981358.1|BY981358
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|162246016|gb|FC424388.1|FC424388
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAAEST: gi|100448690|gb|CJ972989.1|CJ972989
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
EST: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAG GAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
genomic: TTTTGGAGGCATGATTTTCGTGCTGGTGTACTGCACCGCCGGTATCTCAGgtacacgagg ... aatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAA
atgctcttgctgacgcttactaaaattttatgaacttttctctggaatttgacagGAGGTCATATTAATCCAGCTGTTACGTTCGGCTTGCTGTTGGCACGCAAAATCTCGCTGCCCCGAGCGCTTGCCTACATGATCGCGCAGTGCTTAGGAGC
tactaaa putative branch site (score: 214)
ttactaaaattttatg TA-rich tract