1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tctatagtttccgtttcgatgacagttattcagctgaattttcaacgtggttatcgttgggattgtgattggctgataaatggttgtgggacttctgcagAGTGTACATTGTGGACCCTTGCGACTTGTACAGTAGGTTGAAGCTCACAGTCACACTTTATCTCTTCGAGTGATAAAGTTCTGGTACCACTTGCCATTGT
species | Physcomitrella patens |
transcript | PP1S55_294V6.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACAGCGGTGGTGCTAACTAAGGCATCCGCTGACGAGCAGATTATCACAAA AGTGTACATTGTGGACCCTTGCGACTTGTACAGTAGGTTGAAGCTCACAGT
genomic: ACAGCGGTGGTGCTAACTAAGGCATCCGCTGACGAGCAGATTATCACAAAgtattgtaac ... acttctgcagAGTGTACATTGTGGACCCTTGCGACTTGTACAGTAGGTTGAAGCTCACAGT
cgtggttatcgttgggattgtgattggctgataaatggttgtgggacttctgcagAGTGTACATTGTGGACCCTTGCGACTTGTACAGTAGGTTGAAGCTCACAGTCACACTTTATCTCTTCGAGTGATAAAGTTCTGGTACCACTTGCCATTGT
ggctgat putative branch site (score: 11)
cttctgc putative PPT
tgataaat TA-rich tract