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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gatctagggcaattttttctgtgacaagtcgtgaaagtttattattctaaacagttcattttactgagaattatttcataaaaatttctgtgttctgtagATGAAGGAAATTTCTTTCCGGTTTGATAGGATAGAACCTACCAAGCAGCTAGACAATGAGCATGCAACTACCAGTGGCGTAGGTCGCAGTAACCACCGAA

Basic information

species Physcomitrella patens
transcript PP1S55_289V6.2
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctaaacagttcattttactgagaattatttcataaaaatttctgtgttctgtagATGAAGGAAATTTCTTTCCGGTTTGATAGGATAGAACCTACCAAGCAGCTAGACAATGAGCATGCAACTACCAGTGGCGTAGGTCGCAGTAACCACCGAA
 ttctaaa  putative branch site (score: 2)
                                       tttctgt  putative PPT
            attttactgagaatta  TA-rich tract