1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...tgtttttaaaagtagccttttaactccaggtatatatgttccctgatatcgttaaatacttgtgatctgtaccgataaatgtacttgttacctattgcagCCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAATATGTGTCATGCCTCCATCATCTAGCGGCACTGCTTGTGAGGACAAAAG
species | Physcomitrella patens |
transcript | PP1S4_8V6.1 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: CTCAAGAGGCTGAACGTGTTCTACGCCACTGCTTGACATTACTTGACAAG CCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAAEST: gi|37835163|gb|BJ593175.1|BJ593175
genomic: CTCAAGAGGCTGAACGTGTTCTACGCCACTGCTTGACATTACTTGACAAGgtacaccatt ... cctattgcagCCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAA
EST: CTCAAGAGGCTGAACGTGTTNTACGCCACTGCTTGACATTACTTGACAAG CCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAAEST: gi|162183502|gb|FC359613.1|FC359613
genomic: CTCAAGAGGCTGAACGTGTTCTACGCCACTGCTTGACATTACTTGACAAGgtacaccatt ... cctattgcagCCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAA
EST: CTCAAGAGGCTGAACGTGTTCTACGCCACTGCTTGACATTACTTGACAAG CCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAA
genomic: CTCAAGAGGCTGAACGTGTTCTACGCCACTGCTTGACATTACTTGACAAGgtacaccatt ... cctattgcagCCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAA
atatcgttaaatacttgtgatctgtaccgataaatgtacttgttacctattgcagCCACCTGGAATAGCACAGGACCTTGTTGAAGTTCCTGAGTTGCAGAGGGAATATGTGTCATGCCTCCATCATCTAGCGGCACTGCTTGTGAGGACAAAAG
ccctgat putative branch site (score: 7)
ttaaatactt TA-rich tract