Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162264560|gb|FC440869.1|FC440869EST: AGCTACTGAGACCGTCCCTGGTGGAGATGGATGGGGGCCTGAAGATACAT CGCGCATACACGGTGCCAAGAAGGACGGACTCATGAACAAGATCAAGG
genomic: AGCTACTGAGACCGTCCCTGGTGGAGATGGATGGGGGCCTGAAGATACATgtaaggctcc ... tggttcgcagCGCGCATACACGGTGCCAAGAAGGACGGACTCATGAACAAGATCAAGG
EST:
gi|162264559|gb|FC440868.1|FC440868EST: AGCTACTGAGACCGTCCCTGGTGGAGATGGATGGGGGCCTGAAGATACAT CGCGCATACACGGTGCCAAGAAGGACGGACTCATGAACAAGATCAAGGAGA
genomic: AGCTACTGAGACCGTCCCTGGTGGAGATGGATGGGGGCCTGAAGATACATgtaaggctcc ... tggttcgcagCGCGCATACACGGTGCCAAGAAGGACGGACTCATGAACAAGATCAAGGAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TATGCTGCTGTGGATCCACAAAGGTTGGACTCTGATCGGTCGCCGATTAGAGCTACTGAGACCGTCCCTGGTGGAGATGGATGGGGGCCTGAAGATACATgtaaggctccctgtgttttctctcttgcacatggtcgttgtctgtgcagacatgcgtacttcgattttgagcagagggatctcaccgattttttgattggagtggtagaatccgaagtttcaatttgtttttccttggagtgggtttttgaatcgcctcatgacatgatgtgtggttcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA