1 5' 3' | 2 5' 3' |
...tatgctctcccactaagcttttagctctggttgcatttgcaaatgtaactatactgggttagattgaagtgtactcattaggtgtgacgtccctttccagGATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATGAAAGATAGCGCGCTTCACTCATTCCAGCAAACCAAGGATTCCGCTAATG
species | Physcomitrella patens |
transcript | PP1S420_28V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTAAGGATACTGTTGTGGACAACACGGTTCGGGCCAAGGATTCCATCGTC GATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATGEST: gi|162271149|gb|FC446124.1|FC446124
genomic: CTAAGGATACTGTTGTGGACAACACGGTTCGGGCCAAGGATTCCATCGTCgtaaacccct ... ccctttccagGATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATG
EST: CTAAGGATACTGTTGTGGACAACACGGTTCGGGCCAAGGATTCCATCGTC GATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATG
genomic: CTAAGGATACTGTTGTGGACAACACGGTTCGGGCCAAGGATTCCATCGTCgtaaacccct ... ccctttccagGATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATG
taactatactgggttagattgaagtgtactcattaggtgtgacgtccctttccagGATACTACTTCTCAATACGCTGGTGCAGCTAAGGACAAGCTCGTGGGCATGAAAGATAGCGCGCTTCACTCATTCCAGCAAACCAAGGATTCCGCTAATG
atgtaac putative branch site (score: 10)
cgtccctttcc putative PPT
ttagatt TA-rich tract