1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...aatatcctaatgttcagttttccttgttcttttaatagggttacaaaacatgaatgtaagactgataatggcagtggtccatattgtgttgaatcgacagCTCTATTGCAGATCAAATTGAGAGCAATACATGTCCAATTTGTTTCGAGCTTATGAAATCTCCAGACTTTTCGCCTATTCTGCTTTCTCCTTGCGGCCAC
species | Physcomitrella patens |
transcript | PP1S41_55V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCCTTGTTCTCCATGTGGCCTCATGCGTCAACAATGAGCACAATCACAAG CTCTATTGCAGATCAAATTGAGAGCAATACATGTCCNATTTGTTTCGAGCTEST: gi|18343572|gb|BJ175610.1|BJ175610
genomic: TCCTTGTTCTCCATGTGGCCTCATGCGTCAACAATGAGCACAATCACAAGgtacgagtca ... gaatcgacagCTCTATTGCAGATCAAATTGAGAGCAATACATGTCCAATTTGTTTCGAGCT
EST: TCCTTGTTCTCCATGTGGCCTCATGCGTCAACAATGAGCACAATCACAAG CTCTATTGCAGATCAAATTGAGAGCAATACATGTCCAATTTGTTTCGAGCT
genomic: TCCTTGTTCTCCATGTGGCCTCATGCGTCAACAATGAGCACAATCACAAGgtacgagtca ... gaatcgacagCTCTATTGCAGATCAAATTGAGAGCAATACATGTCCAATTTGTTTCGAGCT
aaacatgaatgtaagactgataatggcagtggtccatattgtgttgaatcgacagCTCTATTGCAGATCAAATTGAGAGCAATACATGTCCAATTTGTTTCGAGCTTATGAAATCTCCAGACTTTTCGCCTATTCTGCTTTCTCCTTGCGGCCAC
gactgat putative branch site (score: 3)
aatgtaa TA-rich tract