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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggagtagtggctcatctgacggaggaactgccaacatttgcatttaagtgcaatactaaaaataagcgaacgtatttggaaatgatttcatttgttacagCTACTGAAAATGCTGAAGTTTTGCAAGGCAGCGACACCCTTGGTGCTGAAACGGTTTTCAACCACTCCAGAATCACTCCAGAAATCAAAAG

Basic information

species Physcomitrella patens
transcript PP1S41_53V6.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aagtgcaatactaaaaataagcgaacgtatttggaaatgatttcatttgttacagCTACTGAAAATGCTGAAGTTTTGCAAGGCAGCGACACCCTTGGTGCTGAAACGGTTTTCAACCACTCCAGAATCACTCCAGAAATCAAAAG
        tactaaa  putative branch site (score: 1)
                                        tttcattt  putative PPT
      aatactaaaaataa  TA-rich tract