1 5' 3' | 2 5' 3' |
...taagattcctattgatgtctcaacacaacaagaatacggacatgggattttcatttagtatacaggatttgggtgttaaccattttttgcgatgctacagGAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAGAAAATAGGGTCCATTGGATCATATAACTTGTTTTAAGGACTGCCATCTT
species | Physcomitrella patens |
transcript | PP1S39_197V6.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AATGGAAAGATGTTCTGGATTACAATGACAAGATTGGTTACCTAGTTCAT GAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAGEST: gi|67701104|gb|BJ961337.1|BJ961337
genomic: AATGGAAAGATGTTCTGGATTACAATGACAAGATTGGTTACCTAGTTCATgtaagttgct ... gatgctacagGAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAG
EST: AATGGAAAGATGTTCTGGATTACAATGACAAGATTGGTTACCTAGTTCAT GAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAG
genomic: AATGGAAAGATGTTCTGGATTACAATGACAAGATTGGTTACCTAGTTCATgtaagttgct ... gatgctacagGAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAG
gattttcatttagtatacaggatttgggtgttaaccattttttgcgatgctacagGAGGATGCCAAAAGACAAGACAAGAACGCTAAAAACAGGTATACTGTTTAGAAAATAGGGTCCATTGGATCATATAACTTGTTTTAAGGACTGCCATCTT
tgttaac putative branch site (score: 42)
atttagtata TA-rich tract