1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAGgttcttgaactccttccagtgcccctcattaaacaatgaaacctcccaagtgtgacattctaaagagtaaaatcattgttctgtatagcccataaatcaa...
species | Physcomitrella patens |
transcript | PP1S397_28V6.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAG CTGACAGAGAAGGCACTTATCAAGGAGGGCTCCCGCTACAGGCAACCGCATEST: gi|162156291|gb|FC332315.1|FC332315
genomic: GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAGgttcttgaac ... gtattaacagCTGACAGAGAAGGCACTTATCAAGGAGGGCTCCCGCTACAGGCAACCGCAT
EST: GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAG CTGACAGAGAAGGCACTTATCAAGGAGGGCTCCCGCTACAGGCAACCGCAT
genomic: GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAGgttcttgaac ... gtattaacagCTGACAGAGAAGGCACTTATCAAGGAGGGCTCCCGCTACAGGCAACCGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGGTGGCCTATTGTGGCACTGATGGCAACGTCCTTCAATTTCAGgttcttgaactccttccagtgcccctcattaaacaatgaaacctcccaagtgtgacattctaaagagtaaaatcattgttctgtatagcccataaatcaa
- TGGTGG