Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18348998|gb|BJ181047.1|BJ181047EST: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATG GCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
genomic: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATGgtgaggttat ... tctgtcacagGCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
EST:
gi|18357511|gb|BJ189570.1|BJ189570EST: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATG GCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
genomic: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATGgtgaggttat ... tctgtcacagGCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
EST:
gi|18346011|gb|BJ178054.1|BJ178054EST: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATG GCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
genomic: CTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATGgtgaggttat ... tctgtcacagGCTGACCATCATGCAGTGGCATATGACGACACTGAAAGTATGCCTATGCGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAAAGGCCGCGCCTTCGACATCGTCGTCTTCGTCATTATAGCGATTTCAGCTACTTTCAGCGATGCCTGCGTCGGTGCTGGATAGCAGGATGTTGTGATGgtgaggttatccgcggggtagtggggtatgtgatgtcttgggctggggtgtattgatggattatggcgtcgtgtcggtgtacgtaattggattgtgcatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG